spectrum, minimum peaks
The value is a non-zero, positive integer, Nmin.
The MS/MS spectra used in peptide sequence searches are composed of a limited number of mass-to-charge ratio:intensity pairs. Many common types of mass spectrometer data systems will generate a mass spectrum during a chromatographic run, even if the parent ion does not fragment. The value of this parameter is used to screen out spectra that contain too few fragment ions to be usefully interpreted.
If the total number of mass-to-charge ratio:intensity pairs is a particular spectrum is N, then the condition that a spectrum is considered to have too few ions to be considered would be:
N < Nmin
see also: spectrum, dynamic range | spectrum, minimum parent m+h
spectrum, minimum fragment mz | spectrum, use noise suppression
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